Acauda Whipps, 2011 (additional source)
Agarella Dunkerly, 1915 (additional source)
Alataspora Schulman, Kovaleva & Dubina, 1979 (additional source)
Alatosporidae Schulman, Kovaleva & Dubina, 1979 accepted as Alatasporidae Schulman, Kovaleva & Dubina, 1979 (basis of record)
Auerbachia Meglitsch, 1960 (additional source)
Auerbachiidae Evdokimova, 1973 accepted as Coccomyxidae Léger & Hesse, 1907 (source of synonymy)
Bipteria Kovaljova, Zubtchenko & Krasin, 1983 (additional source)
Buddenbrockia Schröder, 1910 (additional source)
Cardimyxobolus Ma, Dong & Wang, 1982 (additional source)
Caudomyxon Bauer, 1948 (additional source)
Ceratomyxa Thélohan, 1892 (additional source)
Ceratomyxidae Doflein, 1899 (additional source)
Ceratonova Atkinson, Foott & Bartholomew, 2014 (additional source)
Chloromyxidae Thélohan, 1892 (additional source)
Chloromyxum Mingazzini, 1890 (additional source)
Coccomyxa Léger & Hesse, 1907 (additional source)
Coccomyxidae Léger & Hesse, 1907 (additional source)
Conispora Sankurathri, 1977 accepted as Myxoproteus Doflein, 1898 (source of synonymy)
Cystodiscus Lutz, 1889 (additional source)
Davisia Laird, 1953 accepted as Myxodavisia Zhao, Zhou, Kent & Whipps, 2008 (source of synonymy)
Dicauda Hoffman & Walker, 1978 (additional source)
Disparospora Akhmerov, 1954 accepted as Myxobolus Bütschli, 1882 (source of synonymy)
Ellipsomyxa Køie, 2003 (additional source)
Enteromyxum Palenzuela, Redondo & Alvarez-Pellitero, 2002 (additional source)
Fabespora Naidenova & Zaika, 1969 (additional source)
Fabesporidae Naidenova & Zaika, 1969 (additional source)
Facieplatycauda Wyatt, 1979 accepted as Myxobolus Bütschli, 1882 (source of synonymy)
Gadimyxa Køie, Karlsbakk & Nylund, 2007 (additional source)
Globospora Lom, Noble & Laird, 1975 (additional source)
Gyrospora Qadri, 1962 accepted as Myxobolus Bütschli, 1882 (source of synonymy)
Hennegoides Lom, Tonguthai & Dykova, 1991 (additional source)
Henneguya Thélohan, 1892 (additional source)
Hexacapsula Arai & Matsumoto, 1953 accepted as Kudoa Meglitsch, 1947 (source of synonymy)
Hexacapsulidae Shulman, 1959 accepted as Kudoidae Meglitsch, 1960 (source of synonymy)
Hoferellus Berg, 1898 (additional source)
Hoferia Doflein, 1898 accepted as Hoferellus Berg, 1898 (source of synonymy)
Kentmoseria Lom & Dyková, 1995 (additional source)
Kudoidae Meglitsch, 1960 (additional source)
Laterocaudata Chen & Hsieh, 1984 (additional source)
Latyspora Bartošová, Freeman, Yokoyama, Caffara & Fiala, 2011 (additional source)
Lentospora Plehn, 1904 accepted as Myxobolus Bütschli, 1882 (source of synonymy)
Leptotheca Thélohan, 1895 accepted as Ceratomyxa Thélohan, 1892 (source of synonymy)
Lomosporus Gupta & Khera, 1988 accepted as Neothelohanellus Das & Haldar, 1986 (source of synonymy)
Meglitschia Kovaljova, 1988 (additional source)
Mitraspora Fujita, 1912 accepted as Hoferellus Berg, 1898 (additional source)
Myxidiidae Thélohan, 1892 (additional source)
Myxidium Bütschli, 1882 (additional source)
Myxobilatidae Shulman, 1953 (additional source)
Myxobilatus Davis, 1944 (additional source)
Myxobolidae Thélohan, 1892 (additional source)
Myxobolus Bütschli, 1882 (additional source)
Myxodavisia Zhao, Zhou, Kent & Whipps, 2008 (additional source)
Myxoproteus Doflein, 1898 (additional source)
Myxosoma Thélohan, 1892 accepted as Myxobolus Bütschli, 1882 (additional source)
Myxozoa (additional source)
Neobipteria Kovaljova, Gajevskaja & Krasin, 1986 (additional source)
Neochloromyxum Matsumoto, 1954 accepted as Kudoa Meglitsch, 1947 (source of synonymy)
Neohenneguya Tripathi, 1952 (additional source)
Neomyxobolus Chen & Hsieh, 1973 (additional source)
Neoparvicapsula Gayevskaya, Kovaljova & Schulman, 1982 (additional source)
Neothelohanellus Das & Haldar, 1986 (additional source)
Noblea Kovaljova, 1989 (additional source)
Octospina Hsieh & Xiao, 1993 (additional source)
Ortholinea Shulman, 1962 (additional source)
Ortholineidae Lom & Noble, 1984 (additional source)
Palliatus Schulman, Kovaleva & Dubina, 1979 (additional source)
Paramyxoproteus Wierzbicka, 1986 (additional source)
Paraortholinea Kovaljova in Shulman, Donets & Kovaljova, 1997 accepted as Kentmoseria Lom & Dyková, 1995 (source of synonymy)
Parapileispora Naidenova & Zaika, 1970 accepted as Unicapsula Davis, 1924 (source of synonymy)
Parazschokkella Kalavati & Narasimhamurti, 1987 accepted as Zschokkella Auerbach, 1909 (source of synonymy)
Parvicapsula Shulman, 1953 (additional source)
Parvicapsulidae Shulman, 1953 (additional source)
Pentacapsula Naidenova & Zaika, 1970 accepted as Kudoa Meglitsch, 1947 (source of synonymy)
Pentacapsulidae Naidenova & Zaika, 1970 accepted as Kudoidae Meglitsch, 1960 (source of synonymy)
Phlogospora Qadri, 1962 (additional source)
Pileispora Naidenova & Zaika, 1970 accepted as Unicapsula Davis, 1924 (source of synonymy)
Podospora Chen & Hsieh, 1984 accepted as Sphaerospora Thélohan, 1892 (source of synonymy)
Polysporoplasma Sitja-Bobadilla & Alvarez-Pellitero, 1995 accepted as Sphaerospora Thélohan, 1892 (source of synonymy)
Polysporoplasmidae accepted as Sphaerosporidae Davis, 1917 (source of synonymy)
Pseudalataspora Kovaljova & Gayevskaya, 1983 (additional source)
Renispora Kalavati, Longshaw & MacKenzie, 1996 (additional source)
Rudicapsula Kalavati & Narasimhamurti, 1984 accepted as Myxobolus Bütschli, 1882 (source of synonymy)
Saccosporidae Canning, Okamura & Curry, 1996 (additional source)
Schulmania Kovaljova, Zubchenko & Krasin, 1983 (additional source)
Septemcapsula Hsieh & Chen, 1984 accepted as Kudoa Meglitsch, 1947 (source of synonymy)
Septemcapsulidae Hsieh & Chen, 1984 accepted as Kudoidae Meglitsch, 1960 (source of synonymy)
Sigmomyxa Karlsbakk & Køie, 2012 (additional source)
Sinuolinea Davis, 1917 (additional source)
Sinuolineidae Shulman, 1959 (additional source)
Soricimyxum Prunescu, Prunescu, Pucek & Lom, 2007 (additional source)
Sphaeromyxa Thélohan, 1892 (additional source)
Sphaeromyxidae Lom & Noble, 1984 (additional source)
Sphaeromyxina accepted as Variisporina (source of synonymy)
Sphaerospora Thélohan, 1892 (additional source)
Sphaerosporidae Davis, 1917 (additional source)
Spinavaculidae Hsieh & Xiao, 1993 (additional source)
Spirosuturia Chen & Hsieh, 1984 (additional source)
Tetracapsula Canning, Okamura & Curry, 1996 accepted as Buddenbrockia Schröder, 1910 (source of synonymy)
Tetracapsuloides Canning, Tops, Curry, Wood & Okamura, 2002 (additional source)
Tetraspina Xie & Chen, 1988 accepted as Kudoa Meglitsch, 1947 (source of synonymy)

 Synonymy

 for Neothelohanellus Das & Haldar, 1986

Possible junior synonym of Thelohanellus Kudo, 1933 [details]

 Synonymy

 for Paramyxoproteus Wierzbicka, 1986

Possible a junior synonym of Bipteria Kovaljova, Zubtchenko & Krasin, 1983 [details]

 Synonymy

 for Thelohanelloides Sarkar, 2009

Possible junior synonym of Coccomyxa Léger & Hesse, 1907 [details]

 Synonymy

 for Triangulamyxa Azevedo, Corral & Matos, 2005

Possible junior synonym of Triangula Chen & Hsieh, 1984 [details]